Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952188.1_cds_XP_016491961.1_82224
CDS Infomation

[gene=LOC107811526] [db_xref=GeneID:107811526] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like isoform X1] [protein_id=XP_016491961.1] [location=complement(join(796..882,971..1365,1484..1607,1957..2055,2165..2260,2377..2476,2644..2693,2780..2881,2969..3046,3240..3506,3599..3698,3816..4077,4465..4510))] [gbkey=CDS]
Sequence

ATGAGTGGCAAAATGTCAGGACCTCTTGAACGACCAGTCAGGCCAAGTATGGAAAATATT
GATATTGAAAACACTGAGGAGGAGAGGAAGCCAAGGCTTGGGTCATTCAAGAAAAAGGCA
CTTAATGCCTCCAACAAATTCAGACAGTCTCTTAAAAAAACTGGCCGGAGAAACAGTAGA
GTCATGTCTGTTGTCTTCGAGGATGAACATGACGCTGAGGAATCAAAGGCAGTTGATGCC
TTCCGTCAAGCACTTATCCTGGAGGAATTACTTCCTGCTAAACATGATGATTATCATATG
ATGCTGAGGTTTTTGAAGGCCAGAAAATTTGAATTAGAGAAAGCAAAGCAGATGTGGTCT
GATATGCTTAATTGGAGGAAGGAATTTGGTGCAGACACTATCATGGAGGACTTTGAGTTC
AAGGAAAAAGAGGAGGTCGTCAAGTACTATCCTCAAGGGCATCACGGAGTTGACAAAGAT
GGAAGACCAGTATATATCGAAAGAATTGGTCAAGTAGATTCTACCAAGCTCTTGCAAGTC
ACAACAATGGACCGTTATCTCAAGTACCACGTGCAAGAGTTCGAGAGGACTTTCAATGAC
AAATTGCCAGCTTGCTCCATTGCAGCCAAAAAGCATATTGATACAAGCACAACTATTTTG
GATGTACAAGGAGTGGGACTTAAGAATTTCAACAAATCAGCAAGGGACCTCCTTCAATGC
ATCCAAGGGATTGATGGTAACAATTATCCTGAGAGCTTGTGTCGTATGTATATCATCAAT
GCTGGTTCTGGATTCAGGCTTTTGTGGAACTCTGTCAAGTCATTCCTTGACCCAAAGACG
ACTGCAAAGATCAACGTTCTTGGTAACAAGTACCAGAGCAAATTGCTTGAAATAATTGAT
GCCAGTGAACTTCCAGAATTCTTAGGTGGTACATGTACTTGTGCTGAAAAAGGAGGATGT
ATGGTTTCTGATAAAGGCCCGTGGAATGATCCAGAAATAATGAAGATGGTTCACAGTGGC
ATGCATAAATGCTCAAAGAAAAGTGCCAGTCCAGCAGTTGATGAGAAAACAATTTCCGAG
GATGGCAATGCCATTCCGAAGGAAGCAAAGAAGAGCAATTCCATTAAAATGAGAACTGCC
TCTTCCAAAGTCCAAAGGGATCATGTATCTCATATGCAGCTCTCCACTGTCCATGAGGAA
GTTGAAGTAAAGAAAAACCTCCCTAGTGCATATGATTCTGATAAGTGCATCCCTGTGGTG
GACAAAGTAATTGATTCAACTATGCCTAAAGCTACAAAAGCCGACAACTATGCCATTGCA
AAAGCTTCAGATTTCTTACCAATGCACGATATTTCTAAGTCACCCGAAGGATTTAGCAAC
CACCTTTTCACTGGAGTGATGACATTCGTGATGGGGGTCGTGACAATGGTCCGAATGACA
CGCAATATGCCAAGAAAGCTTACGGATTCGACCCTCTTGTCAGGTTCCCTAAAGGGCGTT
GACATGGTTAAACCACAAGCTCAAGAATATCGGTTGAATGGACCTGCCATCTCGAATAAT
GAGTACTTTAGCATGATGAAACGGATGGGAGAGCTCGAGGAGAAGGTCATTACTCTTAGC
AACAAGCCTAGTGCCTTACCACCTGAGAAAGAGGAAATGCTCAACAATGTCATGAGTCAT
GTTGATAAATTGGAACAAGAGCTTTGTGCAACCAAGATGGCACTTGAGAAAGCCCTTGCT
CGTCAAGAGGAGCTCTTAGCCTACATTGAGAAGAAGAAGAAAAAGAAGAACTTCTTTGGT
TTCTAA

Peptide Sequence

PEP ID

XP_016491961.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH12-like isoform X1 [Nicotiana tabacum]
Sequence

MSGKMSGPLERPVRPSMENIDIENTEEERKPRLGSFKKKALNASNKFRQSLKKTGRRNSR
VMSVVFEDEHDAEESKAVDAFRQALILEELLPAKHDDYHMMLRFLKARKFELEKAKQMWS
DMLNWRKEFGADTIMEDFEFKEKEEVVKYYPQGHHGVDKDGRPVYIERIGQVDSTKLLQV
TTMDRYLKYHVQEFERTFNDKLPACSIAAKKHIDTSTTILDVQGVGLKNFNKSARDLLQC
IQGIDGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTAKINVLGNKYQSKLLEIID
ASELPEFLGGTCTCAEKGGCMVSDKGPWNDPEIMKMVHSGMHKCSKKSASPAVDEKTISE
DGNAIPKEAKKSNSIKMRTASSKVQRDHVSHMQLSTVHEEVEVKKNLPSAYDSDKCIPVV
DKVIDSTMPKATKADNYAIAKASDFLPMHDISKSPEGFSNHLFTGVMTFVMGVVTMVRMT
RNMPRKLTDSTLLSGSLKGVDMVKPQAQEYRLNGPAISNNEYFSMMKRMGELEEKVITLS
NKPSALPPEKEEMLNNVMSHVDKLEQELCATKMALEKALARQEELLAYIEKKKKKKNFFG
F

Transcript Sequence

Gene sequence data has not been registered.